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chicken α nfl  (AvesLabs)


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    AvesLabs chicken α nfl
    Chicken α Nfl, supplied by AvesLabs, used in various techniques. Bioz Stars score: 98/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    a Illustration of rotarod behavioral test shown in b , k . b Rotarod test results from shCtrl AAV ( n = 5) and sh TubAR -1 AAV ( n = 5) secondary motor cortex-injected mice. c Schematic illustration of MRI analysis. d MRI images of Slice 8 (vermis) in four shCtrl AAV and four sh TubAR -1 AAV mice. Arrows indicate areas with altered MRI signals between shCtrl AAV and sh TubAR -1 AAV mice. e Schematic illustration of the microscopic analytic region for f – q . f , h , n , p Representative immunostaining images <t>of</t> <t>CALBINDIN</t> ( f ), CNP ( h ), NeuN ( n ), and vGLUT1 ( p ) in the shCtrl AAV and sh TubAR s AAV mice at cerebellar cortex region. Slice thickness, 40 µm. g , i , o , q Quantification of CALBINDIN, CNP, NeuN, and vGLUT1 using ImageJ in f , h , n , p ( n = 3). j , l Representative immunostaining images of <t>NFL</t> ( j ) and CNP ( l ) in the shCtrl AAV and sh TubAR s AAV mice at white matter region. Slice thickness, 40 µm. k , m Quantification of NFL and CNP using ImageJ in j , l ( n = 3). r Rotarod test results from shCtrl AAV ( n = 36), sh TubAR -1 AAV ( n = 39) and sh TubAR -2 AAV ( n = 13) cerebellum-injected mice. s Illustration of open-field behavioral test shown in t , u . t , u Total movement distance ( t , left), representative recorded routes ( t , right) and velocity of active movement ( u ) of open-field test from shCtrl AAV ( n = 10), sh TubAR -1 AAV ( n = 10), and sh TubAR -2 AAV ( n = 10) cerebellum-injected mice. Data are represented as means ± SEM. Statistical significance was determined using unpaired t -test with Welch’s correction ( g , i , k , m , o , q ) or mixed-effects model with Geisser–Greenhouse correction ( b , r ); ns, P > 0.05; * P < 0.05; ** P < 0.01; *** P < 0.001. AAV adeno-associated virus, ML molecular layer, PCL Purkinje cell layer, GCL granule cell layer, WM white matter, PC Purkinje cell.
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    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for <t>neurofilament</t> light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.
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    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for <t>neurofilament</t> light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.
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    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for <t>neurofilament</t> light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.
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    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for <t>neurofilament</t> light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.
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    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for <t>neurofilament</t> light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.
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    Image Search Results


    a Illustration of rotarod behavioral test shown in b , k . b Rotarod test results from shCtrl AAV ( n = 5) and sh TubAR -1 AAV ( n = 5) secondary motor cortex-injected mice. c Schematic illustration of MRI analysis. d MRI images of Slice 8 (vermis) in four shCtrl AAV and four sh TubAR -1 AAV mice. Arrows indicate areas with altered MRI signals between shCtrl AAV and sh TubAR -1 AAV mice. e Schematic illustration of the microscopic analytic region for f – q . f , h , n , p Representative immunostaining images of CALBINDIN ( f ), CNP ( h ), NeuN ( n ), and vGLUT1 ( p ) in the shCtrl AAV and sh TubAR s AAV mice at cerebellar cortex region. Slice thickness, 40 µm. g , i , o , q Quantification of CALBINDIN, CNP, NeuN, and vGLUT1 using ImageJ in f , h , n , p ( n = 3). j , l Representative immunostaining images of NFL ( j ) and CNP ( l ) in the shCtrl AAV and sh TubAR s AAV mice at white matter region. Slice thickness, 40 µm. k , m Quantification of NFL and CNP using ImageJ in j , l ( n = 3). r Rotarod test results from shCtrl AAV ( n = 36), sh TubAR -1 AAV ( n = 39) and sh TubAR -2 AAV ( n = 13) cerebellum-injected mice. s Illustration of open-field behavioral test shown in t , u . t , u Total movement distance ( t , left), representative recorded routes ( t , right) and velocity of active movement ( u ) of open-field test from shCtrl AAV ( n = 10), sh TubAR -1 AAV ( n = 10), and sh TubAR -2 AAV ( n = 10) cerebellum-injected mice. Data are represented as means ± SEM. Statistical significance was determined using unpaired t -test with Welch’s correction ( g , i , k , m , o , q ) or mixed-effects model with Geisser–Greenhouse correction ( b , r ); ns, P > 0.05; * P < 0.05; ** P < 0.01; *** P < 0.001. AAV adeno-associated virus, ML molecular layer, PCL Purkinje cell layer, GCL granule cell layer, WM white matter, PC Purkinje cell.

    Journal: Cell Discovery

    Article Title: LncRNA TubAR complexes with TUBB4A and TUBA1A to promote microtubule assembly and maintain myelination

    doi: 10.1038/s41421-024-00667-y

    Figure Lengend Snippet: a Illustration of rotarod behavioral test shown in b , k . b Rotarod test results from shCtrl AAV ( n = 5) and sh TubAR -1 AAV ( n = 5) secondary motor cortex-injected mice. c Schematic illustration of MRI analysis. d MRI images of Slice 8 (vermis) in four shCtrl AAV and four sh TubAR -1 AAV mice. Arrows indicate areas with altered MRI signals between shCtrl AAV and sh TubAR -1 AAV mice. e Schematic illustration of the microscopic analytic region for f – q . f , h , n , p Representative immunostaining images of CALBINDIN ( f ), CNP ( h ), NeuN ( n ), and vGLUT1 ( p ) in the shCtrl AAV and sh TubAR s AAV mice at cerebellar cortex region. Slice thickness, 40 µm. g , i , o , q Quantification of CALBINDIN, CNP, NeuN, and vGLUT1 using ImageJ in f , h , n , p ( n = 3). j , l Representative immunostaining images of NFL ( j ) and CNP ( l ) in the shCtrl AAV and sh TubAR s AAV mice at white matter region. Slice thickness, 40 µm. k , m Quantification of NFL and CNP using ImageJ in j , l ( n = 3). r Rotarod test results from shCtrl AAV ( n = 36), sh TubAR -1 AAV ( n = 39) and sh TubAR -2 AAV ( n = 13) cerebellum-injected mice. s Illustration of open-field behavioral test shown in t , u . t , u Total movement distance ( t , left), representative recorded routes ( t , right) and velocity of active movement ( u ) of open-field test from shCtrl AAV ( n = 10), sh TubAR -1 AAV ( n = 10), and sh TubAR -2 AAV ( n = 10) cerebellum-injected mice. Data are represented as means ± SEM. Statistical significance was determined using unpaired t -test with Welch’s correction ( g , i , k , m , o , q ) or mixed-effects model with Geisser–Greenhouse correction ( b , r ); ns, P > 0.05; * P < 0.05; ** P < 0.01; *** P < 0.001. AAV adeno-associated virus, ML molecular layer, PCL Purkinje cell layer, GCL granule cell layer, WM white matter, PC Purkinje cell.

    Article Snippet: The primary antibodies used were chicken anti-NFL (Abcam, Cat#ab72997, RRID: AB_1267598, 1:300), rabbit anti-CALBINDIN (Abcam, Cat#ab108404, RRID: AB_10861236, 1:100), mouse anti-CNP (Abcam, Cat#ab6319, RRID: AB_2082593, 1:300), rabbit anti-NeuN (Abcam, Cat#ab177487, RRID: AB_2532109, 1:300), or rabbit anti-vGLUT1 (Abcam, Cat#ab227805, RRID: AB_2868428, 1:100).

    Techniques: Injection, Immunostaining, Virus

    (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for neurofilament light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: (A) Representative fluorescence microscopy images of dorsal root ganglia (DRGs) from WT and GAN knockout mice stained for neurofilament light (NFL) after 2, 4, and 7 days in vitro (DIV). Arrowheads denote NFL aggregation in the soma of GAN DRGs. Note that NFL aggregates are already present after 2 DIV. Scale bar, 30 µm. (B) The GAN phenotype can be recapitulated by lentiviral delivery of shRNA targeting the Gan gene. Scale bar, 30 µm. After 12 DIV, axonal fragmentation, a sign of neurodegeneration, occurs in GAN-silenced DRGs, as denoted by arrowheads; large aggregate shown in zoom. (C) Quantification of axonal fragmentation was accomplished using Fiji’s measurement tool, reported here as the means of 3 independent experiments +/-SEM. ***p<0.001 by a two-tailed unpaired t-test.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: Fluorescence, Microscopy, Knock-Out, Staining, In Vitro, shRNA, Two Tailed Test

    (A) Volcano plot showing the distribution of measured proteins extracted from DRG cultures in which GAN was silenced using shRNA (shGAN). (B) Plot showing top-ranked altered pathways in GAN where pathway activation (change in z-score) is shown (orange represents up-regulation and blue represents down-regulation). (C-D) Plots showing altered proteins for the phagosome formation and phagosome maturation pathways. Adjusted p-values denoted by *p<0.05, **p<0.001, and ***p<0.0001. NFL = neurofilament light, NFM= neurofilament medium, and PRFN = peripherin.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: (A) Volcano plot showing the distribution of measured proteins extracted from DRG cultures in which GAN was silenced using shRNA (shGAN). (B) Plot showing top-ranked altered pathways in GAN where pathway activation (change in z-score) is shown (orange represents up-regulation and blue represents down-regulation). (C-D) Plots showing altered proteins for the phagosome formation and phagosome maturation pathways. Adjusted p-values denoted by *p<0.05, **p<0.001, and ***p<0.0001. NFL = neurofilament light, NFM= neurofilament medium, and PRFN = peripherin.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: shRNA, Activation Assay

    (A) Representative fluorescence images of DRG neurons from WT or GAN knockout mice co-stained for the cytoskeleton marker neurofilament light (NFL) and the autophagosome marker LC3. Autophagosomes are excluded from neurofilament aggregates, and LC3 puncta are found at the periphery of the aggregates (white arrowhead). (B) WT or GAN knockout mouse DRGs co-stained for the cytoskeletal marker NFL and the lysosomal marker LAMP-1. Two phenotypes are observed in GAN DRG neurons with neurofilament aggregates: lysosomes are either excluded (circular dotted line) or co-localized with neurofilament aggregates (arrowhead). Scale bar, 30 µm. Representative images from three independent experiments.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: (A) Representative fluorescence images of DRG neurons from WT or GAN knockout mice co-stained for the cytoskeleton marker neurofilament light (NFL) and the autophagosome marker LC3. Autophagosomes are excluded from neurofilament aggregates, and LC3 puncta are found at the periphery of the aggregates (white arrowhead). (B) WT or GAN knockout mouse DRGs co-stained for the cytoskeletal marker NFL and the lysosomal marker LAMP-1. Two phenotypes are observed in GAN DRG neurons with neurofilament aggregates: lysosomes are either excluded (circular dotted line) or co-localized with neurofilament aggregates (arrowhead). Scale bar, 30 µm. Representative images from three independent experiments.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: Fluorescence, Knock-Out, Staining, Marker

    Representative fluorescence images of DRG neurons silenced for gigaxonin (shGAN) and control neurons (shSCR) co-stained for NFL and (A) mucolipin-1 and vacuolar ATPase or (B) cathepsin B and cathepsin D. While cathepsin D is excluded from neurofilament aggregates, the three other lysosomal proteins are sequestered in aggregates in shGAN DRG neurons. Scale bar, 30 µm. Arrowheads highlight lysosomal proteins clumped in NFL aggregates in the shGAN condition.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: Representative fluorescence images of DRG neurons silenced for gigaxonin (shGAN) and control neurons (shSCR) co-stained for NFL and (A) mucolipin-1 and vacuolar ATPase or (B) cathepsin B and cathepsin D. While cathepsin D is excluded from neurofilament aggregates, the three other lysosomal proteins are sequestered in aggregates in shGAN DRG neurons. Scale bar, 30 µm. Arrowheads highlight lysosomal proteins clumped in NFL aggregates in the shGAN condition.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: Fluorescence, Staining

    (A) Representative live imaging fluorescence images of control and shGAN DRGs transduced with NFL-GFP tagged lentivirus and treated with red lysotracker to visualize lysosomes. Expression of the NFL-GFP construct in shGAN DRG neurons allowed neurofilament aggregate visualization in living cells. shGAN induces an increase in the number of lysosomes (B) and the surface area covered by these organelles (C). Lysotracker mean intensity is also increased in shGAN cultures (D). Note that as observed after NFL and LAMP-1 co-staining, lysotracker dye is also mainly excluded from neurofilament aggregates (circular dotted line). Scale bar, 30 µm. Quantitative data are presented as means +/-SEM, with ***p<0.001 by a two-tailed unpaired t-test. Representative images from three independent experiments.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: (A) Representative live imaging fluorescence images of control and shGAN DRGs transduced with NFL-GFP tagged lentivirus and treated with red lysotracker to visualize lysosomes. Expression of the NFL-GFP construct in shGAN DRG neurons allowed neurofilament aggregate visualization in living cells. shGAN induces an increase in the number of lysosomes (B) and the surface area covered by these organelles (C). Lysotracker mean intensity is also increased in shGAN cultures (D). Note that as observed after NFL and LAMP-1 co-staining, lysotracker dye is also mainly excluded from neurofilament aggregates (circular dotted line). Scale bar, 30 µm. Quantitative data are presented as means +/-SEM, with ***p<0.001 by a two-tailed unpaired t-test. Representative images from three independent experiments.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: Imaging, Fluorescence, Transduction, Expressing, Construct, Staining, Two Tailed Test

    (A) Representative fluorescence images of control and shGAN DRGs co-stained for NFL and TFEB showing sequestering of the transcription factor (arrowhead). Scale bar, 30 µm. (B) Higher magnification pictures showing decreased TFEB localization in the nuclear compartment in shGAN DRG neurons. Accompanying plots show that TFEB has decreased intensity, and that nuclear size is similar between control and shGAN DRG neurons. (C) Representative fluorescence images of control and shGAN DRG neurons co-stained for NFL and 14-3-3. Neurofilament aggregates sequester 14-3-3 (arrowhead). Scale bar, 30 µm.

    Journal: bioRxiv

    Article Title: Neurofilament accumulation disrupts autophagy in giant axonal neuropathy

    doi: 10.1101/2024.03.29.587353

    Figure Lengend Snippet: (A) Representative fluorescence images of control and shGAN DRGs co-stained for NFL and TFEB showing sequestering of the transcription factor (arrowhead). Scale bar, 30 µm. (B) Higher magnification pictures showing decreased TFEB localization in the nuclear compartment in shGAN DRG neurons. Accompanying plots show that TFEB has decreased intensity, and that nuclear size is similar between control and shGAN DRG neurons. (C) Representative fluorescence images of control and shGAN DRG neurons co-stained for NFL and 14-3-3. Neurofilament aggregates sequester 14-3-3 (arrowhead). Scale bar, 30 µm.

    Article Snippet: The following primary antibodies were used: Neurofilament NFL chicken polyclonal / CPCA-NF-L / Encor LC3A/B monoclonal / #12741/ Cell Signaling Technology LAMP-1 rabbit polyclonal / ab24170 / abcam GAPDH rabbit monoclonal / #2118 / Cell Signaling Technology TFEB rabbit polyclonal / SAB2108453 / Labome TFEB rabbit polyclonal / A303-773A / Bethyl Laboratories 14-3-3 rabbit polyclonal / #51-0700 / Cell Signaling Technology Cathepsin B mouse monoclonal / ab58802 / abcam Cathepsin D mouse monoclonal / ab75852 / abcam.

    Techniques: Fluorescence, Staining